Categories
IGC IGCoffeeConvo Interfaces of Global Change IGEP

IGCoffeeConvo with Susan Whitehead

[vc_row][vc_column][vc_column_text]

November 20, 2020

Written by Gaelle Blanvillain

We resumed our IGC CoffeeConvo session over Zoom this Fall 2020 semester on November 16 with GCC faculty Dr. Susan Whitehead meeting with IGC fellows Isaac VanDiest, Korin Jones and Gaelle Blanvillain.  This was a great opportunity to not only chat about science, but also to interact in an informal way with each other, something that is becoming increasingly rare during this Covid-19 era.

Our conservation ranged broad topics, we all discussed what our PhD research projects entail, from foraging behavior in birds using cool techniques like metabarcoding, to the microbiome of frogs in the light of climate change and an emerging disease, chytridiomycosis, to the emergence of snake fungal disease in Europe, which could have devastating population effects.  We related our research projects to how Covid-19 has impacted our field season, and some of our future research questions.  We realized that we might have to slightly shift paths to make our research feasible while Covid-19 is impacting our lives.

On a more personal note, we also shared some of the struggles we are encountering, and how we are coping in this unprecedented situation.  This might take the form of drinking more coffee (and appreciating good quality coffee), spending time in our gardens, or enjoying cooking!

In the end, we all felt uplifted from our conservations and realized how positive and just nice it is to engage with each other and to remind ourselves that we are in this together.

If you are interested in participating in an upcoming virtual CoffeeConvo, contact Amber Wendler at awendler@vt.edu.  This is a great opportunity to share and engage with others!

[/vc_column_text][/vc_column][/vc_row][vc_row][vc_column][vc_separator style=”shadow”][/vc_column][/vc_row]

Categories
Announcements Global Change Interfaces of Global Change IGEP

New Diversity and Rural Environmental Health fellowship opportunities for PhD students

[vc_row][vc_column][vc_column_text]

November 23, 2020

 

With support from the Fralin Life Sciences Institute and the Virginia Tech Graduate School, the Global Change Center (GCC) is pleased to announce two new graduate fellowship opportunities intended to help diversify and strengthen our IGC IGEP community.

Our new Global Change Diversity Fellowships are designated for recruiting new Ph.D. students from underrepresented communities to Virginia Tech. The Rural Environmental Health Fellowships are intended to help expand existing strengths in studying environmental health issues in rural communities.  Both of these fellowship opportunities will enable us to attract new talent to our IGEP and further diversify the perspectives within our group.

Together with the existing Global Change fellowships awarded to current IGC IGEP students, the Global Change Center will offer a total of eight graduate fellowship opportunities for the 2021-22 academic year.  All fellowships include 12 months of graduate stipend and in-state tuition (~$40,000 total value).  Please visit the Graduate Fellowship Opportunities page for eligibility, application and deadline information.

[/vc_column_text][vc_row_inner][vc_column_inner width=”2/3″][vc_column_text]

Diversity Fellowship Program

New in 2021, the Global Change Center will award two graduate assistantships to new Ph.D. students from underrepresented groups focusing on the social and/or environmental challenges associated with rapid global changes such as pollution, invasive species, climate change, and habitat loss. [/vc_column_text][/vc_column_inner][vc_column_inner width=”1/3″][vc_single_image image=”52847″ img_size=”150×150″ alignment=”center” style=”vc_box_border_circle_2″][/vc_column_inner][/vc_row_inner][/vc_column][/vc_row][vc_row][vc_column][vc_row_inner][vc_column_inner width=”2/3″][vc_column_text]

Rural Environmental Health Fellowship Program

New in 2020, the Global Change Center will award two graduate assistantships to Ph.D. students who will engage in interdisciplinary activities that advance research at the nexus of environmental and health sciences in rural settings.[/vc_column_text][/vc_column_inner][vc_column_inner width=”1/3″][vc_single_image image=”53169″ img_size=”150×150″ alignment=”center” style=”vc_box_border_circle_2″][/vc_column_inner][/vc_row_inner][vc_row_inner][vc_column_inner width=”2/3″][vc_column_text]

Global Change Fellowship Program

The Interfaces of Global Change (IGC) Interdisciplinary Graduate Education Program (IGEP) awards four Ph.D. assistantships every academic year intended to support students who have demonstrated commitment to and engagement within the IGC program, and who will benefit from the funding in a way that will enhance the interdisciplinary and global-change aspects of their research.[/vc_column_text][/vc_column_inner][vc_column_inner width=”1/3″][vc_single_image image=”50373″ img_size=”150×150″ alignment=”center” style=”vc_box_border_circle_2″][/vc_column_inner][/vc_row_inner][/vc_column][/vc_row][vc_row][vc_column][vc_separator style=”shadow”][/vc_column][/vc_row]

Categories
Climate Change Faculty Spotlight Research Water

Warmer mountaintops, wetter coasts

[vc_row][vc_column][vc_column_text]

VT News | November 20, 2020

[/vc_column_text][vc_column_text]

At the edge of a retreating glacier, bedrock terrain that has been hidden under layers of ice is seeing light for the first time in several hundred years. On mountain peaks, trees experiencing warmer weather are gradually moving higher than established tree lines. Along Virginia’s coast, sea levels are rising by as much as 1 inch every four years.

These seemingly small changes to our landscapes are the frontiers where two faculty members in the College of Natural Resources and Environment’s Department of Geography are investigating how climate change will impact both the natural world and the communities where we live.

Climate challenges to coastal living

On our coasts, new lines of inquiry are also being fueled by and necessitated by climate change.

As sea levels rise and storms become more frequent and severe, there is an urgent need to understand community-scale responses to accelerating coastal risks. In Virginia, Assistant Professor and Global Change Center affiliate Anamaria Bukvic works with stakeholders to capture their experiences with coastal flooding and the ways they are coping with it, to better inform adaptation and resilience policies and programs.

“We are currently exploring the role of sense-of-place in a household’s decision to stay or move from a coastal community in response to flooding,” explained Bukvic, who teaches a course on the societal impacts of climate change. “We’re also investigating potential tipping points or cascading events on a community and household level that may lead to permanent relocation from flood-affected coastal locations.”

As a human geographer, Bukvic studies interactions between people and places using mixed methods, such as geospatial analysis, interviews, and surveys. She notes that the coronavirus pandemic has presented an obstacle in her efforts to interact with stakeholders.

“A significant portion of my work is done in person with communities and people,” she said. “When we learned this past spring that we could no longer collect data in person, we had to quickly adapt and move all of our primary data collection efforts to different modalities, like mail and online surveys and interviews via Zoom. The silver lining is that COVID-19 has inspired us to innovate and develop new and complementing ways to conduct our research.”

Bukvic further studies the impacts of recurrent or nuisance flooding on households’ decisions to consider relocation.

“While a majority of our respondents state it will take a big disaster like Katrina or Sandy to drive them away, smaller but frequent flood events can also serve as stressors that will gradually push people out of their communities,” she explained. “Even inconveniences like school delays and closures, longer commutes to work, and flooded parking lots can have a significant impact on people’s willingness to relocate.”

Bukvic, a Fellow with the National Center for Atmospheric Research’s Early Career Faculty Innovator Program and associate director of Virginia Tech’s Center for Coastal Studies housed in the Fralin Life Sciences Institute, notes that there are paralleling coastal challenges and responses to climate change threats across the world.

“We conducted a systematic literature review to identify which factors define sense-of-place in the context of natural hazards, disasters, and population mobility,” she said. “Based on our analysis, we developed a new measure of sense-of-place and applied it to rural and urban coastal case study locations in the U.S. and found that some considerations are remarkably similar across the globe. For example, people in rural areas generally have stronger attachments to their community due to greater social cohesion, connections to the land and natural environment, and their cultural identity.”

[/vc_column_text][vc_column_text]

Understanding emerging mountain ecosystems

Professor Lynn Resler researches high elevation ecosystems in North America, studying the dynamics that contribute to alpine tree line vegetation change. An ecological biogeographer, Resler examines current ecological processes taking place in remote locations.

“A lot of my work is predictive: I’m looking at what is happening right now and using that to understand what will happen in the future,” she said. “Understanding pattern-process relationships is key to figuring out how these ecosystems are going to be impacted by climate change.”

Resler, who has nearly 20 years of field experience working above the tree line in the Rocky Mountains as well as high elevation peaks in the Appalachian Mountains, has shown that vegetation characteristics in alpine environments are informed by a complex interplay between terrain topography and interactions taking place between plants and pathogens.

One example can be found in whitebark pine forests in the Rockies, where Resler and her collaborators provided crucial research on the spread of white pine blister rust, caused by an invasive fungal pathogen that moves from gooseberry or currant plants to white pines. While other studies suggested that high-altitude pines in cold, dry climates wouldn’t be affected by the fungus, Resler was able to document the spread of the blight above the tree line.

“Our findings led to a rich trajectory of research,” she noted. “Demonstrating that damage and mortality caused by blister rust inhibits the migration of whitepark pine means that we will see a change in the spatial pattern and function of tree lines throughout the Rockies.”

More recently, Resler, who teaches courses in biogeography and mountain geography, has been researching ecosystems that develop as land becomes exposed in the wake of glacier melt in Montana’s Glacier National Park.

“There is a great deal of research on the retreating of glaciers, but not as much on what is happening on the terrain that is exposed by that retreat,” she explained. “I’m looking at vegetation colonization processes at the forefront of glaciers.”

Resler noted that colonization of that new land is a slow process and one that is informed significantly by what kinds of rock exist underneath the ice.

“Geomorphic processes are an important bottleneck in plant succession in these places,” she said. “Plant colonization is very much tied to the nature of the underlying bedrock and glacial geomorphic processes that break down bedrock.”

Resler noted that on both mountaintop tree lines and glacier edges, climate models, while important, cannot alone predict what developing ecosystems will look like because many factors contribute to species range dynamics, including plant interactions, landscape processes, and invasive species.

“I think there’s an expectation that as glaciers retreat, the ecosystems that develop on newly exposed terrain will be the same as those that currently exist in the surrounding environments. But under changing climate scenarios, there are opportunities for new kinds of plants to colonize. The lags in colonization of surrounding plants are leaving space for invasive species to take hold and may alter the landscape significantly.”

Thinking broadly to meet a complex challenge

Both Bukvic and Resler recognize that the Department of Geography has a crucial role to play in bettering our understanding of the impacts of climate change in both the natural world and the human one.

“One of the advantages of the department is that it is highly interdisciplinary,” Bukvic explained. “We have the necessary skills and expertise to tackle emerging, complex issues, such as climate change and coastal resilience, across various physical and human dimensions.”

“Our students are increasingly aware of emerging climate change issues and are interested in finding solutions for some of the pressing challenges that are already affecting natural, built, and human coastal systems,” she continued. “We have a unique opportunity to shape a new workforce of geographers who are equipped with skills and knowledge to engage in a dialogue on coastal resilience and to actively influence the future of our coasts.”

Resler, who has led undergraduate and graduate students on research trips to Washington’s Cascade Mountains as well as study abroad experiences in Antarctica and New Zealand, notes that cultivating a sophisticated understanding of how various areas of research are interconnected is crucial for understanding climate change.

“I love to help students see the big picture, and field experiences are one of the best ways to achieve this goal,” she said. “I think it’s important to help them navigate broad-concept critical thinking while providing them with hands-on, course-relevant information.”

– Written by David Fleming

[/vc_column_text][vc_separator][vc_column_text]

CONTACT:
Krista Timney
(540) 231-6157

[/vc_column_text][vc_separator style=”shadow”][/vc_column][/vc_row]

Categories
New Publications News Research

Lurking in genomic shadows: How giant viruses fuel the evolution of algae

[vc_row][vc_column][vc_column_text]

VT News | November 18, 2020

[/vc_column_text][vc_column_text]

Viruses are tiny invaders that cause a wide range of diseases, from rabies to tomato spotted wilt virus and, most recently, COVID-19 in humans. But viruses can do more than elicit sickness — and not all viruses are tiny.

Large viruses, especially those in the nucleo-cytoplasmic large DNA virus family, can integrate their genome into that of their host – dramatically changing the genetic makeup of that organism. This family of DNA viruses, otherwise known as “giant” viruses, has been known within scientific circles for quite some time, but the extent to which they affect eukaryotic organisms has been shrouded in mystery – until now.

“Viruses play a central role in the evolution of life on Earth. One way that they shape the evolution of cellular life is through a process called endogenization, where they introduce new genomic material into their hosts. When a giant virus endogenizes into the genome of a host algae, it creates an enormous amount of raw material for evolution to work with,” said Frank Aylward, an assistant professor in the Department of Biological Sciences in the Virginia Tech College of Science and an affiliate of the Global Change Center housed in the Fralin Life Sciences Institute.

Mohammad ‘Monir’ Moniruzzaman, a postdoctoral researcher in Aylward’s lab, studies endogenous viral elements, which are fragments or whole sequences of raw viral DNA that have been inserted into the infected host’s genome.

Together, Aylward and Moniruzzaman have recently discovered that endogenous viral elements that originate from giant viruses are much more common in chlorophyte green algae than previously thought.

Their findings were recently published in Nature.

Chlorophytes, a group of green algae, are an important group of photosynthetic organisms that are at the base of the food chain on many ecosystems and produce massive amounts of food and oxygen across the planet. Chlorophytes thrive in our lakes and ponds – and their dynamics with giant viruses as well as their unique evolutionary history, were central to Aylward and Moniruzzaman’s research.

Chlorophyte algae are close relatives of land plants, and studying their interactions with giant viruses may shed some light on the roles that the viruses played during the early evolution of plants.

“We now know that endogenous viral elements are common across chlorophytes, which makes you think that plants might also interact with these giant viruses. There is some data that suggests that some early plants, like moss and ferns, did experience these endogenization events over the evolutionary timeline. But we are not exactly sure about the extent of this phenomenon in other early plants,” said Moniruzzaman, the first author on this published paper.

To learn more about the prevalence of endogenous viral elements in algae, Moniruzzaman and Aylward performed a bioinformatic analysis on the sequenced genomes of different algae groups.

They discovered that 24 of the 65 genomes that were analyzed had some kinds of viral signatures in their genomes, which originated from repeated endogenization of distinct viruses. In one algal organism, Tetrabaena socialis, researchers found that around 10 percent of its genes originated from a virus in the nucleo-cytoplasmic large DNA virus family.

Although the endogenization of viruses have been well studied, studies have mostly been limited to small RNA viruses, such as the human immunodeficiency virus (HIV), the retrovirus that is responsible for causing acquired immunodeficiency syndrome (AIDS).

Aylward and Moniruzzaman’s study is one of the first to put a spotlight on large eukaryotic DNA viruses, which marks a major shift in the field.

Electron micrograph image of a AaV, a giant virus that infects and kills a unicellular alga that causes harmful algae blooms. Giant viruses that belong to the same group as AaV can frequently insert their genomes into the genomes of their hosts. Image courtesy of Chuan Xiao and Yuejiao Xian, University of Texas at El Paso; Steven W. Wilhelm and Eric R. Gann, University of Tennessee, Knoxville.

 

[/vc_column_text][vc_single_image image=”53313″ img_size=”medium” add_caption=”yes” alignment=”center”][vc_column_text]“These large endogenous viral elements are a lot more common than previously thought. Now that we have a systematic analysis, other researchers are really going to start to pay attention. This study shows that endogenous viral elements are pretty common, and so it might possibly be a common mechanism of genome evolution. I think these results will broaden our view on the role of giant viruses as mere agents of host mortality to significant players in host genome evolution,” said Moniruzzaman.

Now that Moniruzzaman and Aylward have confirmed that endogenization is happening in larger viruses, they wonder what conditions are causing these viruses to inject EVEs into green algae in the first place – and why the hosts show no signs of rejecting them.

“We don’t know what the mechanism is or how the DNA is being maintained, but it is possible that the endogenization is a random, almost accidental process. And once the viral DNA is endogenized, it can alter the evolutionary dynamics of the host, and that it could further influence the evolution of that lineage,” said Aylward.

The idea that there is a potentially beneficial relationship at play between the host and its virus is of particular interest to Moniruzzaman.

“There might be a reason as to why the host is keeping these viral genomes within them. It’s not like these viral genes are causing the hosts to become unsuccessful or unable to survive in the environment. So that’s the thing: Are the endogenous viral elements beneficial to the host? And how are they getting in there and staying in there?” asked Moniruzzaman.

– Written by Kendall Daniels[/vc_column_text][vc_separator][vc_column_text]

Related Articles:

 

[hr]

CONTACT:

Kristin Rose Jutras 

(540) 231-6614

[/vc_column_text][vc_separator style=”shadow”][/vc_column][/vc_row]

Categories
IGC IGCoffeeConvo Interfaces of Global Change IGEP

IGCoffeeConvo with Brian Romans

[vc_row][vc_column][vc_column_text]

November 19, 2020

Written by Amber Wendler

IGC fellows Amanda Pennino (Forest Resources and Environmental Conservation), Melissa Burt (Biological Sciences), and Amber Wendler (Biological Sciences) recently met virtually with GCC faculty member Dr. Brian Romans (Geosciences). Dr. Romans is a sedimentary geologist and his research has brought him to places like Antarctica and Patagonia. In addition to traveling to cool locations, Dr. Romans’ research has also allowed him to travel back in time millions of years and he described examining soil cores as “reading a book of Earth’s history.” We quickly realized that being from different disciplines meant that we did not all have the same concept of time. To help us gain a better understanding of Earth’s massive timescales, Dr. Romans recommended a book by Marcia Bjornerud called Timefulness: How Thinking Like a Geologist Can Help Save the World which we are all excited to read (you can find an eBook version via VT libraries, or watch a relevant seminar recording by Dr. Bjornerud online here: https://youtu.be/Pd9seKaplDI)

While we discussed our research interests for a bit, one topic that couldn’t escape any of our minds was the pandemic. Despite being on week 11 of the semester none of us had quite gotten used to working remotely. We all seemed to be craving new strategies for being productive in this environment while maintaining a good work life balance and overall well-being. We agreed that this is not an easy task and were transparent about some of the challenges we have been facing this semester. Some strategies people have tried are virtual co-working groups, and a shared document with peers to hold each other accountable for completing tasks. Thankfully, it seems that everyone has experienced an increase in empathy from their colleagues leading to flexible deadlines, lower expectations, and additional support when needed. This conversation was refreshing because it reaffirmed that we do not have to deal with the hardships of the pandemic alone. If you are reading this, check in on a community member that you haven’t talked to in a while and ask them how they’re doing, as it’s clear that these conversations can go a long way.

[/vc_column_text][/vc_column][/vc_row][vc_row][vc_column][vc_separator style=”shadow”][/vc_column][/vc_row]

Categories
Accolades Climate Change Faculty Spotlight Grants News Research

Five teams awarded GCC seed grants in fall 2020

[vc_row][vc_column][vc_separator style=”dotted”][vc_column_text]

November 20, 2020

Each year, the Global Change Center (GCC) solicits proposals from GCC faculty to support interdisciplinary research that will lead to collaborative proposals submitted to extramural funding sources. Selected projects link multiple faculty programs and take advantage of unique combinations of expertise at VT, have societal implications and/or a policy component, deal with emerging global change issues that have regional significance, and have high potential to eventually leverage external resources.

The fall 2020 application cycle saw the highest number of proposals submitted to date, resulting in five teams awarded a cumulative total of $108K in seed grant funding from the Global Change Center, with support from the Fralin Life Sciences Institute.

Congratulations GCC faculty and collaborators![/vc_column_text][/vc_column][/vc_row][vc_row][vc_column width=”1/4″][vc_single_image image=”52887″ img_size=”large” alignment=”center” style=”vc_box_shadow_border_circle_2″][/vc_column][vc_column width=”3/4″][vc_column_text]

Taking the Pulse of Global Shark Populations

INVESTIGATORS:

[/vc_column_text][/vc_column][/vc_row][vc_row][vc_column][vc_separator style=”dotted”][/vc_column][/vc_row][vc_row][vc_column width=”1/4″][vc_single_image image=”52907″ img_size=”large” alignment=”center” style=”vc_box_shadow_border_circle_2″][/vc_column][vc_column width=”3/4″][vc_column_text]

Salty carbon: Testing the consequences of freshwater salinization on stream food web dynamics and ecosystem metabolism

INVESTIGATORS:

[/vc_column_text][/vc_column][/vc_row][vc_row][vc_column][vc_separator style=”dotted”][/vc_column][/vc_row][vc_row][vc_column width=”1/4″][vc_single_image image=”52929″ img_size=”large” alignment=”center” style=”vc_box_shadow_border_circle_2″][/vc_column][vc_column width=”3/4″][vc_column_text]

Using a global weed to disentangle environment and host effects on plant-microbe interactions across nested spatial scales 

INVESTIGATORS:

[/vc_column_text][/vc_column][/vc_row][vc_row][vc_column][vc_separator style=”dotted”][/vc_column][/vc_row][vc_row][vc_column width=”1/4″][vc_single_image image=”52945″ img_size=”large” alignment=”center” style=”vc_box_shadow_border_circle_2″][/vc_column][vc_column width=”3/4″][vc_column_text]

Do altered soil moisture patterns restructure soil microbial communities and their contributions to greenhouse gas emissions?

INVESTIGATORS:
  • Dr. Brian Strahm, Forest Resources and Environmental Conservation
  • Dr. Brian Badgley, School of Plant and Environmental Sciences
  • Dr. Durelle Scott, Biological Systems Engineering
  • Dr. Angela Possinger, Forest Resources and Environmental Conservation

[/vc_column_text][/vc_column][/vc_row][vc_row][vc_column][vc_separator style=”dotted”][/vc_column][/vc_row][vc_row][vc_column width=”1/4″][vc_single_image image=”52917″ img_size=”large” alignment=”center” style=”vc_box_shadow_border_circle_2″][/vc_column][vc_column width=”3/4″][vc_column_text]

Developing a predictive model for in-stream embeddedness to link physical processes with biotic responses

INVESTIGATORS:

[/vc_column_text][/vc_column][/vc_row][vc_row][vc_column][vc_separator style=”shadow”][/vc_column][/vc_row]

Categories
Accolades Blog Interfaces of Global Change IGEP Outreach Science Communication Student Spotlight Video

IGC fellows win big in the 2020 Virtual Nutshell Games

[vc_row][vc_column][vc_column_text]

November 9, 2020

The 5th annual Nutshell Games took place over a new virtual format this past Saturday, November 7th. Bravo! to all graduate student presenters! Five prizes were awarded this year, four of which recognized IGC fellows: Amber Wendler, Abby Lewis, Bennett Grooms, and Sara Teemer Richards. Congratulations and way to impress, IGC!!

Read more and see the full list of presenters and awardees at: https://communicatingscience.isce.vt.edu/Announcements.html

Check out the IGC fellows’ videos! 

[/vc_column_text][/vc_column][/vc_row][vc_row][vc_column width=”1/2″][vc_video link=”https://youtu.be/1i8bZOeKtb8″][/vc_column][vc_column width=”1/2″][vc_video link=”https://youtu.be/kw70MrT9GHA”][/vc_column][/vc_row][vc_row][vc_column width=”1/2″][vc_video link=”https://youtu.be/bzKMzSlhG_4″][/vc_column][vc_column width=”1/2″][vc_video link=”https://youtu.be/dnUG76RYpsM”][/vc_column][/vc_row][vc_row][vc_column width=”1/4″][/vc_column][vc_column width=”1/2″][vc_video link=”https://youtu.be/beuwwnQyL7U”][/vc_column][vc_column width=”1/4″][/vc_column][/vc_row][vc_row][vc_column][vc_separator][/vc_column][/vc_row]