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Accolades Faculty Spotlight News

William Hopkins receives Virginia’s highest faculty honor

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VT News | December 11, 2020

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William Hopkins, Global Change Center director and professor of wildlife in the College of Natural Resources and Environment, has been selected to receive a 2021 Outstanding Faculty Award from the State Council of Higher Education for Virginia (SCHEV) and Dominion Energy.

The award, which recognizes commitment to excellence in teaching, research, knowledge integration, and public service, is the highest honor awarded to faculty at Virginia colleges and universities.

Hopkins was named associate executive director of Virginia Tech’s Fralin Life Sciences Institute earlier this year. In this role, he will help develop and implement the vision and strategic directions for the institute to tackle grand life science challenges at the interface of the environment and the human condition. He is also the founding director of the institute’s Global Change Center and director of the Interfaces of Global Change interdisciplinary Ph.D. program.

A faculty member in the Department of Fish and Wildlife Conservation, Hopkins researches the ways that wildlife responds to climate change, habitat loss, and other global threats. He directs the Wildlife Ecotoxicology and Physiological Ecology Laboratory and is spearheading research about how human impacts to the environment influence the physiological processes and behaviors of wildlife.

“It is really satisfying to have Dr. Hopkins’ passion, dedication, commitment, and accomplishments be recognized by the SCHEV,” said Paul Winistorfer, dean of the College of Natural Resources and Environment. “His accomplishments in the study of wildlife response to anthropogenic disturbances are significant, and his ability to bring a diverse group of faculty stakeholders together is remarkable.”

Hopkins’ research on avian biology motivated him to take a leading role in the construction of the college’s Research Aviary, located on the western edge of Virginia Tech’s campus. He received the Mitchell A. Byrd Award for outstanding scientific achievement in ornithology from the Virginia Society of Ornithology in 2018. He has also led research on land use impacts on hellbender salamanders and toxicological risks affecting freshwater turtles.

As an educator, Hopkins has taught courses on Vertebrate Physiological Ecology, Wildlife Biology, Tropical Ecology, and Conservation in the Galápagos, as well as a Global Change Seminar and the Global Change Capstone course.

“Dr. Hopkins has been a leader in the department and across the campus,” said Joel Snodgrass, head of the Department of Fish and Wildlife Conservation, “and his dedication to student success at both the undergraduate and graduate levels is almost super-human. His work to engage undergraduate students in meaningful research is innovative and highly effective, and his graduate students go on to very successful careers.”

Hopkins has published nearly 200 peer-reviewed papers and chapters on a broad range of wildlife conservation topics. He has received numerous awards for his teaching and mentorship work and has worked collaboratively with state and national agencies, stakeholders, and rural communities to aid in preserving and protecting natural environments and resources.

He has served on four National Academies of Sciences, Engineering, and Medicine committees, and his expertise has been sought in the aftermath of significant environmental disasters, including the Tennessee Valley Authority ash spill, the BP oil spill in the Gulf of Mexico, and the Tisza River cyanide spill in Hungary. His research has been featured by NPR, the BBC, “60 Minutes,”The New York Times, and elsewhere.

Hopkins is one of 12 professors across the commonwealth to be honored by the SCHEV and Dominion Energy this year. Award nominees are reviewed by a panel of peers and chosen by a committee of leaders from both the public and private sectors. Hopkins joins an elite group of three dozen Virginia Tech faculty members who have previously received this award.

“To receive this recognition from the commonwealth is a tremendous honor,” Hopkins said, “but it is only possible because I am lucky enough to be part of an amazing collaborative community. I feel so fortunate to be at a world-class institution, surrounded by innovative colleagues and stellar students, doing what I love most.”

— Written by David Fleming

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Krista Timney

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Categories
Evolution New Publications Research

Virginia Tech paleontologists find pterosaur precursors that fill a gap in early evolutionary history

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VT News | December 9, 2020

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Here’s the original story of flight. Sorry, Wright Brothers, but this story began way before your time – during the Age of the Dinosaurs.

Pterosaurs were the earliest reptiles to evolve powered flight, dominating the skies for 150 million years before their imminent extinction some 66 million years ago.

However, key details of their evolutionary origin and how they gained their ability to fly have remained a mystery; one that paleontologists have been trying to crack for the past 200 years. In order to learn more about their evolution and fill in a few gaps in the fossil record, their closest relatives had to be identified.

With the help of newly discovered skulls and skeletons that were unearthed in North America, Brazil, Argentina, and Madagascar in recent years, Virginia Tech researchers Sterling Nesbitt and Michelle Stocker from the Department of Geosciences in the College of Science have demonstrated that a group of “dinosaur precursors,” called lagerpetids, are the closest relatives of pterosaurs.

“Where did pterosaurs come from?’ is one of the most outstanding questions in reptile evolution; we think we now have an answer,” said Nesbitt, who is an associate professor of geosciences and an affiliated faculty member of the Fralin Life Sciences Institute and the Global Change Center.

Their findings were published in Nature.

Fossils of Dromomeron gregorii, a species of lagerpetid, were first collected in Texas in the 1930s and 1940s, but they weren’t properly identified until 2009. Unique to this excavation was a well-preserved partial skull and braincase, which, after further investigation, revealed that these reptiles had a good sense of equilibrium and were likely agile animals.

After finding more lagerpetid species in South America, paleontologists were able to create a pretty good picture of what the lagerpetids were; which were small, wingless reptiles that lived across Pangea during much of the Triassic Period, from 237 to 210 million years ago.

Artistic rendering of Dromomeron (foreground) and associated dinosaurs and relatives, based off of fossils from Ghost Ranch, NM. Illustration courtesy of Donna Braginetz.
Artistic rendering of Dromomeron (foreground) and associated dinosaurs and relatives, based off of fossils from Ghost Ranch, New Mexico. Illustration courtesy of Donna Braginetz.

 

And in the past 15 years, five research groups from six different countries and three continents have come together to right some wrongs in the evolutionary history of the pterosaur, after the recent discovery of many lagerpetid skulls, forelimbs, and vertebrae from the United States, Brazil, Argentina, and Madagascar.

What gave paleontologists the idea to take a closer look at lagerpetids as the closest relatives of pterosaurs? Paleontologists have been studying the bones of lagerpetids for quite some time, and they have noted that the length and shape of their bones were similar to the bones of pterosaurs and dinosaurs. But with the few fossils that they had before, it could only be assumed that lagerpetids were a bit closer to dinosaurs.

What really caused a shift in the family tree can be attributed to the recently collected lagerpetid skulls and forelimbs, which displayed features that were more similar to pterosaurs than dinosaurs. And with the help of new technological advances, researchers found that pterosaurs and lagerpetids share far more similarities than meet the eye.

Using micro-computed tomographic (µCT) scanning to reconstruct their brains and sensory systems within the recently discovered skulls, paleontologists determined that the brains and sensory systems of lagerpetids had many similarities with those of pterosaurs.

“CT data has been revolutionary for paleontology,” said Stocker, who is an assistant professor of vertebrate paleontology and an affiliated faculty member of the Fralin Life Sciences Institute and the Global Change Center.

“Some of these delicate fossils were collected nearly 80 years ago, and rather than destructively cutting into this first known skull of Dromomeron, we were able to use this technology to carefully reconstruct the brain and inner ear anatomy of these small fossils to help determine the early relatives of pterosaurs.”

One stark and mystifying finding was that the flightless lagerpetids had already evolved some of the neuroanatomical features that allowed the pterosaurs to fly, which brought forth even more information on the origin of flight.

“This study is a result of an international effort applying both traditional and cutting-edge techniques,” said Martín D. Ezcurra, lead author of the study from the Museo Argentino de Ciencias Naturales in Buenos Aires, Argentina. “This is an example of how modern science and collaboration can shed light on long-standing questions that haunted paleontologists during more than a century.”

A partial skeleton of Lagerpeton (hips, leg, and vertebrae) from ~235 million years from Argentina. Further examination of this specimen helped tie features of lagerpetids to pterosaurs. Photo courtesy of Sterling Nesbitt.
A partial skeleton of Lagerpeton (hips, leg, and vertebrae) from ~235 million years from Argentina. Further examination of this specimen helped tie features of lagerpetids to pterosaurs. Photo courtesy of Sterling Nesbitt.

 

Ultimately, the study will help bridge the anatomical and evolutionary gaps that exist between pterosaurs and other reptiles. The new evolutionary relationships that have emerged from this study will create a new paradigm, providing a completely new framework for the study of the origin of these reptiles and their flight capabilities.

With the little information that paleontologists had about early pterosaurs, they had often attributed extremely fast evolution for the acquisition of their unique body plan. But now that lagerpetids are deemed the precursors of pterosaurs, paleontologists can say that pterosaurs evolved at the same rate as other major reptile groups, thanks to the newly discovered “middle man.”

“Flight is such a fascinating behaviour, and it evolved multiple times during Earth’s history,” said Serjoscha W. Evers, of the University of Fribourg. “Proposing a new hypothesis of their relationships with other extinct animals is a major step forward in understanding the origins of pterosaur flight.”

Some questions still remain in this evolutionary mystery. Now that lagerpetids are the closest relatives of pterosaurs, why are they still lacking some of the key characteristics of pterosaurs, including the most outstanding of those – wings?

“We are still missing lots of information about the earliest pterosaurs, and we still don’t know how their skeletons transformed into an animal that was capable of flight,” said Nesbitt.

Nesbitt, Stocker, and a team of Virginia Tech graduate and undergraduate students will continue to study animals that appeared in the Triassic Period – a period of time in Earth history when many familiar groups of vertebrates, such as dinosaurs, turtles, mammal relatives, and amphibians, first appeared. If and when conditions are safe, they plan on going into the field to collect more fossils from the Triassic Period.

Maybe soon, we will have more information to put some finishing touches on the original story of flight.

If you are an undergraduate or high school student who is interested in this discovery, the Virginia Tech Department of Geosciences has a brand new Paleobiology option within the Geosciences major, which focuses on the history of life on our planet. To learn more, contact April Newcomer (apriln@vt.edu).

– Written by Kendall Daniels and Steven Mackay

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Kristin Rose Jutras

(540) 231-6614

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Categories
Global Change New Publications Research Water

Low oxygen levels in lakes and reservoirs may accelerate global change

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VT News | December 9, 2020

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Header image: Beaverdam Reservoir in Vinton, Virginia. Photo courtesy of Alexandria Hounshell.
 

Because of land use and climate change, lakes and reservoirs globally are seeing large decreases in oxygen concentrations in their bottom waters. It is well-documented that low oxygen levels have detrimental effects on fish and water quality, but little is known about how these conditions will affect the concentration of carbon dioxide and methane in freshwaters.

Carbon dioxide and methane are the primary forms of carbon that can be found in the Earth’s atmosphere. Both of these gases are partially responsible for the greenhouse effect, a process that increases global air temperatures. Methane is 34 times more potent of a greenhouse gas than carbon dioxide, so knowing how low oxygen levels within lakes and reservoirs affect both carbon dioxide and methane could have important implications for global warming.

Until now, researchers did not have any empirical data from the whole-ecosystem scale to definitively say how changing oxygen can affect these two greenhouse gases.

“We found that low oxygen levels increased methane concentrations by 15 to 800 times at the whole-ecosystem scale,” said Alexandria Hounshell, a postdoctoral researcher in the Department of Biological Sciences in the College of Science. “Our work shows that low oxygen levels in the bottom waters of lakes and reservoirs will likely increase the global warming potential of these ecosystems by about an order of magnitude.”

Virginia Tech researchers just published these findings in a high-impact paper in Limnology and Oceanography Letters.

To determine a correlation between oxygen and methane concentrations, researchers honed in on two reservoirs outside of Roanoke. In collaboration with the Western Virginia Water Authority, the research team operated an oxygenation system in Falling Creek Reservoir, which pumps oxygen into the bottom waters and allows researchers to study oxygen concentrations on a whole-ecosystem scale. By also monitoring Beaverdam Reservoir, an upstream reservoir without an oxygenation system, they were able to compare greenhouse gas concentrations in the bottom waters of both reservoirs. They ran the experiment over three years to see how consistent their findings were over time.

“Methane levels were much higher when there was no oxygen in the bottom waters of these reservoirs; whereas the carbon dioxide levels were the same, regardless of oxygen levels,” said Cayelan Carey, associate professor of biological sciences and affiliated faculty member of the Global Change Center. “With low oxygen levels, our work shows that you’ll get higher production of methane, which leads to more global warming in the future.”

This study was one of the first to experimentally test at the whole ecosystem-scale how different oxygen levels affect greenhouse gases. Logistically, it is extremely challenging to manipulate entire ecosystems due to their complexity and many moving parts. Even though scientists can use computer modelling and lab experiments, nothing is as definitive as the real thing.

“We were able to do a substitution of space for time because we have these two reservoirs that we can manipulate and contrast with one another to see what the future may look like, as lower bottom water oxygen levels become more common. We can say with high certainty that we are going to see these lakes become bigger methane emitters as oxygen levels decrease,” said Carey.

According to Hounshell, the strength of their results lie in the study’s expanse over multiple years. Despite having a range of meteorological conditions over the three years, the study affirmed that much higher methane concentrations in low oxygen conditions happen consistently every year, no matter the air temperature.

Ultimately, this study is crucial for how researchers, and the general public, think about how freshwater ecosystems produce greenhouse gases in the future. With low oxygen concentrations increasing in lakes and reservoirs across the world, these ecosystems will produce higher concentrations of methane in the future, leading to more global warming.

Of course, these ecological changes are not just happening in the Roanoke region. Around the globe, a number of studies have pointed to changing carbon cycling in terrestrial and marine ecosystems. However, this study is one of the few to address this phenomenon in lakes and reservoirs, which are often neglected in carbon budgets. This study will fill in these knowledge gaps and shine a spotlight on what we can do as citizens to solve this problem.

This study suggests that keeping lakes from experiencing low oxygen concentrations in the first place could further prevent them from hitting the tipping point, when they start to become large methane producers. Small decisions can add up. For example, decreasing runoff into lakes and reservoirs can prevent the depletion of oxygen in their bottom waters. “Don’t put a ton of fertilizer on your lawn, and be really strategic about how much fertilizer you use and how you use it,” said Hounshell.

And greenhouse gases are just a small part of the bigger picture of how reservoirs function in the global carbon cycle. Currently, the research team is conducting follow-up oxygen manipulation studies to elucidate other components that contribute to ecosystem change. They will continue to monitor oxygen manipulations in the two Roanoke reservoirs to see how the reservoir can affect the ecosystem for the long haul.

This project was funded by the Virginia Tech Institute for Critical Technology and Applied Science, the Fralin Life Sciences Institute at Virginia Tech, and by National Science Foundation grant DEB-1753639.  

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Kristin Rose Jutras

(540) 231-6614

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Categories
Announcements Faculty Spotlight

Linsey Marr selected as the speaker for Virginia Tech’s fall commencement exercises

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VT News | December 4, 2020

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Hokies graduating this fall will celebrate with the ideal person to provide guidance on safe post-ceremony hugs.

Linsey Marr, the Charles P. Lunsford Professor of Civil and Environmental Engineering and a Global Change Center affiliate, has been selected as the speaker for Virginia Tech’s fall commencement exercises.

Since March, Marr has helped lead the global conversation about the airborne transmission of COVID-19. She’s shared research and advice on topics ranging from how the virus spreads indoors and the impact of different face coverings to how to grocery shop safely and embrace loved ones with a lower risk of contagion.

Despite having been interviewed hundreds of times and quoted thousands more since the global pandemic began, the invitation to speak for the university-wide ceremony was a surprise.

“I thought, ‘Who me? Who me? Aren’t commencement speakers usually dignitaries of some sort?’,” said Marr, one of only a handful of worldwide experts on aerosol transmission of viruses. “But it’s a huge honor to be selected as this semester’s speaker. I realized that it shows how the pandemic has come to dominate everyone’s lives, and it reflects the importance of my research and outreach at this moment in time.”

Fall commencement will be held online Friday, Dec. 18, at 6:15 p.m. ET. During the online broadcast graduates will be honored, degrees will be conferred, and special guests and student leaders will also speak — plus there will be opportunities for friends and family to participate and offer well wishes.

Other speakers offering the Class of 2020 well wishes include alumnus Homer Hickam, famed former NASA engineering and bestselling author; alumna Queen Claye, an Olympic silver medalist; Grant Bommer, president of the Class of 2021; and Nikki Giovanni, poet, University Distinguished Professor, and namesake of the Class of 2020 ring.

Marr, who came to Virginia Tech in 2003 after earning her bachelor’s in engineering science from Harvard and her doctorate from the University of California at Berkeley, has racked up numerous honors during her time at the university. They include a National Institutes of Health New Innovator Award in 2013 and an appointment to a National Academies of Sciences, Engineering, and Medicine board in January.

In 2019, Marr earned the Excellence in Teaching Award from the Center for Excellence in Teaching and Learning, which recognizes a faculty member’s effective, engaged, and dynamic approaches and achievements as an educator.

“My teaching style combines rigorous theory with practical applications and current events,” said Marr in a 2019 Virginia Tech News story. “To emphasize the relevance of course material to real life, I begin most of my lectures with a news story, and then I try to weave personal connections into the ensuing discussion.”

Taking a similar approach to sharing complex information related to the airborne spread of COVID-19 has helped Marr become renowned, both in media circles and in the social media sphere. For example, she’s used the visual of cigarette smoke to explain viral plumes, illustrated mathematically proven safer ways to hug with photos of her and her daughter, and regularly shares practical safety tips for everyday life in the pandemic era.

A June article in The New York Times said, “her Twitter feed is a daily exchange of ideas among fellow scientists, and it’s also peppered with questions from followers, which she tries to answer. Part of the reason Dr. Marr has become so popular in public forums is her ability to explain difficult scientific concepts in easy-to-understand terms.”

Marr’s following on Twitter has grown from about 3,000 in February to more than 28,000. At the top of her feed there’s a pinned Tweet from March 5 warning of the virus’ airborne transmission, showing just how far ahead of many others she was on the topic. The Centers for Disease Control and Prevention didn’t permanently publish a position accepting the virus could be spread by tiny particles lingering in the air until October.

Marr said she aims to convey two basic messages to the graduates — the power of curiosity and community.

“Our students have done a great job of following public health guidelines, enabling us to keep the disease under control on campus,” she said. “They’ve seen first-hand that collective action and a strong sense of community can make a difference.”

“And I hope to say to them, let your curiosity get the better of you, and use all the knowledge at your disposal to explore those burning questions. Do it humbly, work with others, and you can make a difference,” Marr said.

Graduate School celebrates

While there will be one virtual ceremony for all graduates, there will be an opportunity to recognize those who earned a master’s degree or doctorate from Virginia Tech.

Cortney Steele recently earned her doctorate in human nutrition, food, and exercise (HNFE) in the College of Agriculture and Life Sciences. Steele selected HNFE’s option in clinical physiology and metabolism for her doctoral degree due to the diversity the program offered as well as for their experienced and dedicated faculty. She will deliver opening remarks during the commencement ceremony. Read more about Steele.

James L. Moore, the vice provost for diversity and inclusion and chief diversity officer at The Ohio State University and the executive director of the Todd Anthony Bell National Resource Center on the African American Male, will be recognized with the Graduate School’s Distinguished Alumni Award.

Moore received his master’s degree and doctorate in counselor education from Virginia Tech.  He is internationally recognized for his research and work on African American males and has been quoted and featured in major newspapers and was named one of the top 200 most influential scholars in the United States who inform education policy, practice, and reform by Education Week.

More information and details on commencement can be found at vt.edu/commencement.

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Tracy Vosburgh

(540) 231-5396

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Categories
Climate Change News Research

Confronting ecological change takes a collaborative leap with the NEON Ecological Forecasting Challenge

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VT News | December 1, 2020

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Header image:  Abby Road, a terrestrial NEON field site located approximately 18 miles northeast of Vancouver, Washington, and situated in the western foothills of the Cascade Range in the Yacolt Burn State Forest. The site is unique in that it is a dynamically managed forest landscape. Photo courtesy of National Ecological Observatory Network.

Looking to predict beetle abundance and springtime greenness, among other things, the NEON Ecological Forecasting Challenge is looking to mobilize researchers and forecast answers to a complex set of ecological questions.

The National Ecological Observatory Network, otherwise known as NEON, is a continental-scale network of 81 monitoring sites that collects open access ecological data to better understand how ecosystems across the U.S. are changing over time.

“It’s the first of its kind,” said Quinn Thomas, director of the Challenge and associate professor in the Department of Forest Resources and Environmental Conservation in the College of Natural Resources and Environment at Virginia Tech. “Running models to predict ecological data that has yet to be collected across the U.S. is really novel, and doing it across many different fields of ecology simultaneously has never been done before.

”Designed and hosted by 200 contributors within the National Science Foundation-funded Ecological Forecasting Initiative Research Coordination Network (EFI-RCN), the trans-institutional Challenge will launch in 2021 and use data from NEON sites. The Challenge will provide resources and a common framework for generating and submitting forecasts of ecological processes.

“Fundamentally, it’s a means to an end: to advance our capacity to predict the future of nature while generating forecasts that are usable to stakeholders. From a community standpoint, the Challenge is a focal point for sharing knowledge and building a network of scientists and stakeholders engaged in the practice of ecological forecasting,” said Thomas, who is also an affiliated faculty member of the Global Change Center within the Fralin Life Sciences Institute.

The Challenge highlights five different themes: aquatic ecosystems, terrestrial carbon exchange, tick populations, plant phenology, and beetle communities. Each theme involves a different aspect of ecology meant to engage a wide array of researchers.

Since ecological forecasting is a relatively young field, the hope is that the Challenge will build a foundation for ecological forecasting and unravel the uncertainty stakeholders face when managing natural systems.Institutional stakeholders, such as the National Phenology Network and the National Oceanic and Atmospheric Administration, are partnering with the EFI-RCN to refine forecasts during the challenge and reduce uncertainty.

“The ‘if you build it, they will come’ mentality doesn’t work for most decision support,” said Michael Dietze, associate professor in the Department of Earth and Environment at Boston University and lead of the affiliated Ecological Forecasting Initiative. “You have to have the decision-makers involved, and you have to really understand what their needs are.”

A major goal of the Challenge is to foster an atmosphere of community. Participants, no matter their forecasting experience, will have the opportunity to collectively share their forecasts, therefore improving future forecasting models.

“One of the fundamental goals in EFI is to bring the community together and understand what are the cross-cutting challenges that we face regardless of what particular system we work in,” Dietze said. “I think the forecast challenge is a rallying cry for the community to come together behind this effort.”

One of the challenges that the ecological forecasting community faces, Dietze said, is education and training. Thomas, at Virginia Tech, will teach an ecological forecasting course in the spring, as will Dietze at Boston University and Carl Boettiger at UC Berkeley. Undergraduate and graduate students in these courses will be directly participating in the NEON Ecological Forecasting Challenge.

“We hope that it can pull in a new generation of scientists who think about the aspects of ecological forecasting early in their career training,” Thomas said. “Not only does that include producing forecasts, but that’s learning how to do ecology in the context of computational sciences and reproducibility.”

To galvanize these early-career scientists, graduate and postdoctoral students are also going beyond the classroom and leading Challenge themes.“This grassroots effort that the Ecological Forecasting Initiative is bringing on is really awesome, and beyond that, it’s an honor to be a part of it,” said Anna Spiers, a Ph.D. student at the University of Colorado and team leader for the beetle community theme. “I’m really excited to see the range of participants who come to the challenge and the range of models that people create.”

The EFI-RCN encourages students, both undergraduate and graduate, to join the challenge alongside faculty, institutional researchers, and international groups. Participants can submit forecasts as individuals or teams and will be evaluated based on their forecasts’ precision and accuracy. Evaluations and data will be available in real-time through an automated cyberinfrastructure.

Being the Challenge’s inaugural year, Thomas understands this year will look to increase participant numbers and smooth over any wrinkles in anticipation of running the Challenge in future years. Regardless, this year’s challenge is the first step for the EFI-RCN and the ecological community at large to better predict and understand the vital forces of nature.

To register for the EFI-RCN NEON Ecological Forecasting Challenge, visit the challenge’s website.

– Written by Tyler Harris

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Kristin Rose Jutras

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