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Evolution New Courses Uncategorized Undergraduate Experiential Learning

New Undergraduate Study Abroad Course Announcement: Darwin’s Galapagos

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New Course Announcement:

Darwin’s Galapagos: Evolution in the Anthropocene is a new course that will be offered by Drs. Ignacio Moore, William Hopkins and Peter Graham in Spring 2019.

Department of Biology/Fish and Wildlife Conservation
Course Number:
3954
Course Title: Darwin’s Galapagos: Evolution in the Anthropocene
Credits: 4
Semester:
Spring 2019
Time: TBD

Co-taught by professors in 3 departments:

Ignacio Moore, Biological Sciences
William Hopkins, Fish and Wildlife Conservation
Peter Graham, English[/vc_column_text][/vc_column][/vc_row][vc_row][vc_column width=”1/2″][vc_column_text]Course Description:

Voyage in Charles Darwin’s wake in the Galapagos Islands and see firsthand what inspired the unifying concept of life on earth: evolution by natural selection.  Gain historical and on-the spot perspectives on how Darwin’s big idea took shape, and learn how current evolutionary processes are influenced by rapid environmental changes caused by human pressures such as introduced species, over-fishing, pollution, climate change, and ecotourism.

The course is open to all majors and is reading-, writing-, and discussion-intensive.  Students will have extensive readings each week followed by in class discussion and reflective essays.  10-day trip to the Galapagos will occur over spring break.  Students enrolling in the course should be good swimmers and not be prone to sea sickness.[/vc_column_text][/vc_column][vc_column width=”1/2″][vc_single_image image=”25459″ img_size=”large” add_caption=”yes” alignment=”right” onclick=”custom_link” link=”http://www.globalchange.vt.edu/wp-content/uploads/2018/09/Galapagos-2019-Flyer_web.pdf”][/vc_column][/vc_row][vc_row][vc_column][vc_column_text]

To Apply – Contact one of the professors: itmoore@vt.eduhopkinsw@vt.edu; pegraham@vt.edu

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Categories
Evolution New Publications

Researchers examine how the laws of physics impact evolution

From VT News

Think about the fast sprint of a cheetah or the rapid undulation of a swimming fish.

All biological motion is dependent on the rules of mechanics, which is a branch of physics that deals with the motion of material bodies and the forces exerted upon them.

But, how do the static laws of physics impact the dynamic process of evolution? Do stronger relationships between a morphological trait and swimming speed, for example, facilitate or hinder evolution? Virginia Tech and Duke University researchers answer this question with their most recent research.

Using various biomechanical systems in animals, the researchers have demonstrated that mechanical relationships in the structural traits of animals impart distinct, predictable footprints on biological diversity. Specifically, morphological traits that more strongly impact the way an animal moves also evolve faster.

 

Martha Muñoz, an assistant professor of biological sciences in the College of Science

“Our study demonstrates that evolution is shaped by the general laws of physics. We have long known that there are fundamental laws of motion that shape performance space for organisms. But, the laws of mechanics don’t just define the parameter space that organisms can occupy. Mechanical laws also shape the process of evolution itself by guiding the rate of morphological evolution as well as shaping its pattern throughout evolutionary history,” said Muñoz, an assistant professor of biological sciences in the College of Science at Virginia Tech.

Muñoz did much of this research as a post-doctoral fellow in the lab of Sheila Patek, a professor of biology at Duke University. Their findings were recently published in the journal eLife.

“Our findings provide a compelling case for a strong influence of biomechanics on the pace of evolutionary change. We know that physics and biomechanics are central to evolutionary diversification, and our finding of a consistent increase in the rate of evolutionary change in the most tightly correlated parts of the system is surprising and exciting,” said Patek.

Their evolutionary finding opens up numerous possibilities across different organisms and different mechanical systems. The evolutionary footprints that Muñoz and Patek have discovered may be widespread in biological motion.

With the help of researchers from the University of Rhode Island and University of Illinois, Urbana-Champaign, Muñoz chose to focus on four-bar linkages, a simple movable closed chain linkage common in nature that is comprised of four levers connected in a loop by four joints. Examples of four-bar linkages in human-engineered systems include the pedaling of a bicycle or the movement of a pair of locking pliers.

bicycle and locking pliers
Examples of four-bar linkages in the pedaling of a bicycle and locking pliers

Muñoz’s research on these linkages focuses on four biological systems: wrasses, cichlids, sunfish, and mantis shrimp.

“In order to conduct evolutionary analyses, I needed biomechanical and morphological data from numerous species and a good working phylogeny, or evolutionary history, to be available. With these requirements in mind, I was able to study three independent evolutions of four-bar linkage systems: the oral four-bar (wrasses and cichlids), the opercular four-bar (sunfish), and the raptorial four-bar (mantis shrimp),” said Muñoz, an affiliated faculty member of the Global Change Center, an arm of the Fralin Life Science Institute.

Four-bar linkages
A. Four-bar linkage systems have evolved independently multiple times across animals and consist of four rotatable links that transit motion and force. B. The raptorial appendage of a mantis shrimp and four-bar linkage system. Figure courtesy of Martha Muñoz.

Each of these four-bar systems represents an independent evolutionary experiment in a common mechanical system — the same laws of mechanics apply to all of these four-bars, but each one is used in a different ecological context. Mantis shrimp use their raptorial four-bar to rapidly strike at prey, whereas fish use their four-bar linkages to suction food into their mouths. Thus, Muñoz was able to examine whether similar laws of mechanics result in similar evolutionary patterns in various independently evolved mechanical systems.

In multiple groups of fishes and mantis shrimp, the researchers discovered that four-bar linkages evolve in predictable ways: links that impact mechanical output of the system the most evolve the fastest.

This recent study establishes the connection between mechanical sensitivity and evolutionary rate. Muñoz’s next question is how natural selection factors into the equation.

“Are links of high mechanical effect experiencing strong directional selection, or are links of weak mechanical effect experiencing strong stabilizing selection? In other words, I’ve documented an evolutionary pattern, and I’d like to next examine the underlying evolutionary process.” said Muñoz.

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Categories
Evolution New Publications Research

Study: Genetic variation can leave long-lasting stamp on evolutionary patterns

From VT News

[Featured image: An Anolis evermanni lizard, photo courtesy Edmund D. Brodie III.]

A new study from Virginia Tech takes on the decades-old battle of which has more impact on evolution: genetic variation or natural selection.

In a study published in the latest issue of Evolution Letters, Virginia Tech researcher Joel McGlothlin has found that genetic variation can leave a much longer-lasting stamp on evolutionary patterns than was previously thought. Started when McGlothlin was a post-doctoral researcher at the University of Virginia, the study focuses on Anolis lizards, which McGlothlin and other scientists say are “icons” of adaptive radiation, an evolutionary pattern involving the origin of group of related species that differ in appearance and ecological role.

“Different anoles species have evolved different traits that allow them to live in different habitats such as in treetops or on tree trunks,” said McGlothlin, an associate professor in the Department of Biological Sciences, part of the Virginia Tech College of Science. “During the past 40 million years or so, species with body types fitting them into these habitats have evolved several times across different islands in the Caribbean. This suggests that natural selection has had similar effects on evolution under similar conditions.”

However, scientists know that natural selection doesn’t always push a species in the optimal direction, McGlothlin said. Because natural selection works with existing genetic variation, evolution can be “constrained” by genetics. For example, if some traits are not as heritable as others, they may evolve more slowly. Also, when traits are correlated with each other — such as arm length and leg length — it may be more difficult for them to evolve on their own, he added. Although these constraints are important over a few generations, whether they are important over millions of years of evolution is more controversial.

McGlothlin and his team sought to disentangle the roles that natural selection and genetic constraints played in the evolution of body shape among anoles. “What we found was the species become differentiated from each other in ways predicted not only by their habitat, but also by patterns of genetic variation,” McGlothlin said. “Traits that were more genetically variable showed greater evolutionary changes across species. We were really surprised that we still saw this pattern when looking across 40 million years of evolution.”

Joel McGlothlin

In the study, McGlothlin and his team — which included Edmund “Butch” Brodie III, a professor at the University of Virginia and McGlothlin’s former postdoctoral mentor, and Jonathan Losos, a professor of biology at Washington University in St. Louis, Missouri — measured patterns of genetic variation for body-shape traits in seven different species of anoles and compared it to how traits evolved across species. The team also included several undergraduate students from several universities.

They collected adult lizards from Puerto Rico, Jamaica, and the Bahamas and bred them in the lab to produce thousands of offspring. Measuring traits, such as head shape and limb length, in these offspring allowed the researchers to measure how much trait variation was due to heritable differences that could be passed down from parent to offspring.

The team found another surprising result: The relationship between genetic variation and evolution was maintained even though the genetic variation they measured also changed across evolutionary time. Their analysis suggests that that genetic variation isn’t just passive material for natural selection. Instead, it seems to co-evolve with the traits themselves, perhaps changing in response to selection.

“When we began this study, we thought we might be able to provide strong evidence favoring either selection or constraint, but instead, we may have demonstrated just how difficult they are to separate,” McGlothlin wrote in a blog post for Evolution Letters. “At least in anoles, constraint shapes the evolutionary response to selection, but also evolves in response to selection in such a way to keep the two entwined. Perhaps it’s this never-ending creative dance that makes evolution so interesting in the first place.”

The study of these lizards can help scientists understand the evolution of other species, said McGlothlin, who is an affiliated member of the Fralin Life Science Institute’s Global Change Center. “Our results are pretty general, and I wouldn’t be surprised if we saw similar patterns if we looked genetic variation in humans and our closest relatives,” he added.

McGlothlin is continuing to research the role of genetic variation in evolution. “Now, we are asking some similar questions using a single species, the brown anole,” McGlothlin added. “In that species, males and females are really different, and we’re trying to apply what we’ve learned about the evolution of different species to understand how males and females evolve to become different in appearance.”

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Snakes in evolutionary arms race with poisonous newt

CONTACT:
Steven Mackay
540-231-5035

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Categories
Evolution Faculty Spotlight News

Virginia Tech-led study finds oldest footprints of bug dating back 540-plus million years

From VT News

Categories
Evolution

Martha Munoz settles decades-old evolutionary biology question

From VT News:

Evolution can be both stimulated and halted by an animal’s behavior, it just depends which trait you’re talking about, according to a groundbreaking study led by a Virginia Tech researcher.

Dr. Marth Muñoz

The study, published Oct. 25 in the journal American Naturalist, shows behavior can be both a brake and a motor for evolution in a manner where slowing evolution in one trait actually requires accelerating evolution in another, according to Martha Muñoz, a new assistant professor of biological sciences in the College of Science and an affiliate of Virginia Tech’s Global Change Center.

Understanding this delicate stop-and-go dance can help scientists predict how animals will adapt to global change, such as climate change and habitat degradation.

In the case of the anole lizard of the Dominican Republic, thermoregulation — or the ability to control one’s own body temperature — is crucial to survival.

Although it is located in the tropics, the Dominican Republic has lots of mountainous habitat and high elevations that challenge animals like lizards, which cannot regulate their temperature internally, the way that birds and mammals (including people) do.

When the lizards migrated from warm, low elevations to cool, high elevations, body temperature regulation required the lizard to take up a new microhabitat, dwelling on boulders and sheltering in crevices, rather than formerly preferred tree limbs, which were too chilly at higher elevations.

This switch to boulders allowed the lizard to remain quite warm — just as warm, in fact, as its counterparts in the balmy lowlands — despite the much colder habitat.

In a key twist, the lizard also evolved traits important for rock dwelling, such as a flatter skull and shorter legs for skittering into crevices at the first sign of a predator. In other words, the same behavioral switch to boulders that halted physiological evolution also promoted morphological evolution.

In the context of global climate change, these findings suggest that the effects of rising temperatures won’t be limited to directly impacting organisms’ physiology — because of their behavior, it could indirectly impact other features, like their morphology, as well. Such predictions, however, would not have been likely without this new understanding of the multidimensional ways in which behavior impacts evolution.

“Our observation settles a decades-long scientific question about whether behavioral inertia — the ability for behavior to function as a brake for evolution — can occur at the same time as behavioral drive — the ability for behavior to function as a motor for evolution,” said MuñozMuñoz, who is also affiliated with the Fralin Life Science Institute.  “This is a question that first presented itself in the 1940s, and we think we’ve finally come to a conclusion with this paper.”

“This study is a great example of the subtle way that organism and environment interact in evolution — it’s not a one-way relationship, it’s a far more interactive dance,” said Michael Kearney, an associate professor in the School of BioSciences at the University of Melbourne who served as an associate editor for the manuscript.

“Dr. Muñoz’s findings significantly advance our fundamental knowledge of evolutionary processes, and also have broad implications for understanding how animals are responding to rapid environmental changes caused by humans,” said William Hopkins, director of the Global Change Center.  “We are thrilled that Dr. Muñoz has joined the Virginia Tech community.”

The project was part of Muñoz’s doctoral work in the Department of Organismic and Evolutionary Biology at Harvard University, which she completed in 2014.  The co-author on the paper was Jonathan B. Losos, a professor in the in the same department at Harvard University.

[hr]

Story by Lindsay Key, Communications Director, Fralin Life Science Institute

Categories
Evolution News

Joel McGlothlin’s research on snake resistance to tetrodotoxin featured in the Atlantic Magazine

From VT News

A select group of garter snakes can thank their ancestors for the ability to chow down on a poisonous newt and live to tell the tale.

Common garter snakes, along with four other snake species, have evolved the ability to eat extremely toxic species such as the rough-skinned newt — amphibians that would kill a human predator — thanks to at least 100 million years of evolution, according to Joel McGlothlin, an assistant professor of biological sciences in the Virginia Tech College of Science and a Fralin Life Science Institute affiliate.

The nature of that evolution was recently established by McGlothlin’s team and will be published June 20 in the journal Current Biology.

The international team of researchers discovered that the ability to withstand the toxin that the newt produces evolved following a “building blocks” pattern, where an evolutionary change in one gene can lead to changes in another.

In this case, over time, amino acids in three different sodium channels found in nerves and muscle changed, allowing select snakes to resist the numbness and paralysis typically brought on by the toxin.

Resistant muscle gives snakes the best protection against the newt’s toxin, but there’s a catch: Resistant muscle can evolve only in species that already have resistant nerves. McGlothlin’s team found that the ancestors of garter snakes gained toxin-resistant nerves almost 40 million years ago.

“Garter snakes and newts are locked in a coevolutionary arms race where as the newts become more toxic, the snakes become more resistant,” said McGlothlin, who is also affiliated with the Global Change Center at Virginia Tech. “However, without the leg-up provided by those resistant nerves, snakes wouldn’t have been able to withstand enough toxin to get this whole process started.”

This arms race is most intense in pocketed regions along the West Coast, where rough-skinned newts and garter snakes co-exist.

McGlothlin and his team sequenced three sodium channel genes found in 82 species (78 snakes, two lizards, one bird, and one turtle) and mapped the changes they found to evolutionary trees to date when toxic resistance emerged in each. They found that, as time went on, some groups of snakes built up more and more resistance to the toxin. These changes always happened in the same order, with resistant nerves evolving before resistant muscle.

The next step is to see if this pattern is a general phenomenon in other species. A few bird species can also eat the newt and survive. McGlothlin and his team recently received a grant from the National Science Foundation to test whether birds have built up resistance in the same way as snakes.

This work is not just relevant to understanding what snakes have for dinner. “We think that the garter snake’s evolved resistance to the newt’s toxin can be used as a model for understanding complex adaptations that involve more than one gene,” McGlothlin said.

“This study provides insight into the stepwise evolution of an ecologically important trait (resistance to prey toxins), and revealed that the adaptive benefit of changes to individual components of the trait were contingent on antecedent changes in other components,” said Jay Storz, the Susan J. Rosowski Professor of Biology at the University of Nebraska, who was not involved in the research. “This discovery has general significance for understanding the evolution of complex traits.”

Story by Lindsay Key

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This news was also highlighted in the Washington Post and the Atlantic magazine:

The Very Long War Between Snakes and Newts

From The Atlantic

In the mountains of Oregon, there are newts with so much poison in their skin that each could kill a roomful of people. There are also snakes that eat those newts; they’re completely resistant to the toxins. The two are locked in an evolutionary arms race. As the newts become more toxic, the snakes become more resistant. One team of scientists has been studying this evolutionary conflict for five decades, and they’ve now shown that its seeds were planted 170 million years ago—before either snakes or newts even existed.

We know about this ancient conflict because of a young undergraduate student named Edmund “Butch” Brodie Jr. In the early 1960s, he heard a local legend about three hunters who were found dead at their campsite, with no sign of theft, struggle, or foul play. The only thing amiss at the scene was a dead roughskin newt, which the hunters had accidentally boiled in their coffee pot. These dark-backed amphibians have vibrant yellow-orange bellies, which they display to predators by arching their heads and tails over their backs—a clear sign that they’re poisonous. Perhaps those poisons killed the hunters.

Butch tested this idea by collecting newts, grinding up tiny amounts of their skin, and feeding the extracts to other animals. Everything died. The newts proved to be absurdly lethal. Another team of chemists showed that they carry tetrodotoxin (TTX)— the same poison found in the skins and livers of pufferfish. It’s ten thousand times more toxic than cyanide, and among the deadliest substances in nature. Each newt seemed to carry enough to kill any predator hundreds of times over. Why would they be so ludicrously toxic?

Butch found a clue when he checked one of his traps and found a common garter snake devouring a newt. Overcoming his mild phobia of snakes, he collected some and found that they resisted amounts of tetrodotoxin that would kill far larger animals.

While Butch focused on the newts, his son, Edmund Brodie III, became fascinated by the snakes. Together, they showed that throughout western America, places with mildly toxic newts also had mildly resistant snakes. Meanwhile, hotspots with unusually lethal newts also had snakes that withstood staggering levels of tetrodotoxin. The two species were locked in a beautifully coordinated arms race of toxicity and resistance.

 

READ THE FULL STORY AT THE ATLANTIC

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Categories
Climate Change Evolution Global Change

New in Science: Polar bears fail to adapt to lack of food

From BBC NEWS

Polar bears are unable to adapt their behaviour to cope with the food losses associated with warmer summers in the Arctic. Scientists had believed that the animals would enter a type of ‘walking hibernation’ when deprived of prey. But new research says that that bears simply starve in hotter conditions when food is scarce.

The authors say that the implications for the survival of the species in a warmer world are grim.

Back in 2008 polar bears were listed as a threatened species in the US. At that time, the Secretary of the Interior noted that the dramatic decline in sea ice was the greatest threat the bears faced. Polar bears survive mainly on a diet of seals that they hunt on the sea ice – but increased melting in the summer reduces seal numbers and as a result the bears struggle to find a meal.

Some researchers have argued that polar bears would deal with a reduced calorie intake by entering a low-activity state termed ‘walking hibernation’, similar to the way that many species of bear cope with winter. To test this idea, scientists embarked on a dangerous and expensive trial where they attached satellite collars and surgically implanted logging devices to track the bears’ movements and to record physiological details. They studied more than two dozen bears in the Beaufort Sea, north of Alaska. They concluded that in the summer seasons, the bears didn’t slow down, they simply starved when food was short.

“Their metabolism is very much like a typical food limited mammal rather than a hibernating bear,” said John Whiteman from the University of Wyoming, the paper’s lead author. “If you or I were to be food-limited for weeks on end we would look like the bears’ data.”

While the bears may not be able to change their behaviour when it comes to food, they do seem to have a significant adaption that helps them to cope with swimming in cold water. “They have this ability to temporarily allow the outermost portion of the core of the body to cool off substantially and this protects the innermost vital organs – there was not an expectation of that, it was very surprising,” said Whiteman. The researchers detailed the extraordinary swimming ability of the bears in their study, with one female surviving a nine day, 400 mile swim from shore to ice. When she was re-captured some seven weeks later, the bear had lost 22% of her body mass, as well as her cub.

The scientists say that despite this strong performance in cold water, it doesn’t compensate for the lack of food and the inability of the bears to slow down their metabolism in response. “We’ve uncovered what seems to be a fascinating adaptation for swimming in cold arctic waters, but I don’t think that is going to play as big a role in determining their fate as the loss of hunting opportunities will,” said Whiteman.

“We think this data also points towards their eventual decline.”

Read more here.

This paper was published in Science.

Categories
Evolution News

McGlothlin research explores the evolution of toxin resistance in snakes

From VT News:

Snakes in evolutionary arms race with poisonous newt

Blacksburg, November 17, 2014: The rough-skinned newt is easily one of the most toxic animals on the planet, yet the common garter snake routinely eats it. How does a newt which produces enough toxin to kill several grown humans manage to become prey in the food chain?

The answer comes in the form of an evolutionary arms race that pits the toxin of the newt, tetrodotoxin or TTX, against the voltage-gated sodium channels of the snake. The newt’s toxin typically blocks sodium channels, which are found in excitable tissue including muscles, nerves, brain, and heart, but garter snakes seem immune to its effects.

mcgl_joel
Dr. Joel McGlothlin is a faculty member in the Interfaces of Global Change Program

Joel McGlothlin, assistant professor of biological sciences in the College of Science at Virginia Tech with a team of scientists that included his former postdoctoral advisor Edmund Brodie III of the University of Virginia, looked for clues to the evolution of TTX resistance in the DNA sequences of garter snake sodium channels.

“There are nine different sodium channels in reptiles, found in different tissues of the body,” McGlothlin said. “We knew when we started that muscle channels had evolved resistance to TTX in garter snakes, and we predicted that many of the others should have too. If you’re going to eat poison, you not only need to have muscles that work, the nerves that control them have to work too.”

McGlothlin sequenced the DNA of five previously undescribed garter snake sodium channels and examined them for signatures of TTX resistance. Of these, three are found primarily in the brain and two are found in motor and sensory nerves outside the brain. The brain channels had not evolved resistance to TTX at all.

“The brain is protected by the blood-brain barrier, so it makes sense that these channels wouldn’t have evolved resistance” he said. Many chemicals can’t cross this barrier, which separates the fluid around the brain and spinal column from the reset of the body. TTX is one of the things that can’t cross.

“The two nerve channels outside the brain, however,” McGlothlin said, “have both evolved resistance to the toxin, and they’ve done so independently. When we compared the DNA sequences to a closely related lizard, there were changes unique to the snakes that should provide resistance to the toxin.”

The paper, published in the journal Molecular Biology and Evolution, shows that at least three sodium channels contribute to resistance to TTX: NaV1.4 in muscle, NaV1.6 in rapid-firing neurons, and NaV1.7 in sensory neurons involved with smell and pain sensation.

Only garter snakes on the west coast have resistant muscle channels, where they live in proximity to the toxic rough-skinned newts. However, the team showed that resistant nerve channels are found in all garter snakes, even in areas without highly toxic prey.

“Garter snakes here in Virginia have the same resistant channels in their nerves, even though there are no rough-skinned newts around,” McGlothlin said.

Virginia’s red-spotted newts have much less TTX than their western cousins, and resistant nerves might be enough to protect garter snakes that eat them.

“The fact that all garter snake have resistant nerve channels suggests resistant nerves evolved earlier than resistant muscle,” he said, “which might have allowed garter snakes to start eating really poisonous newts in the first place.”

McGlothlin says the work shows that the molecular basis of adaptation is somewhat predictable.

“The evolution of toxin resistance was predictable based on the biology of the snake—only the channels that are vulnerable to the toxin evolved resistance. Also, we see changes in the similar regions of these three genes, which suggests they’re evolving in similar ways in response to the same selection pressure.”

The work has prompted McGlothlin to take a deeper look into evolutionary history as he suspects some of these sodium channels evolved resistance to TTX in the ancestors of garter snakes – perhaps as long as 100 million years ago.

McGlothlin is currently examining the DNA sequences of the Nav gene family across snakes, lizards, and birds – some of which also count newts as a food source. “If we look at this gene family across all of these groups, we should be able to determine whether evolving resistant sodium channels is a general response to eating toxic prey or whether it is unique to snakes,” he said.

Story by Rosaire Bushey; See the original article at VT News